STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111559139IF rod domain-containing protein; Belongs to the intermediate filament family. (455 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
   
 0.729
LRIG1
Leucine rich repeats and immunoglobulin like domains 1.
   
 0.692
LGR6
LRRNT domain-containing protein.
     
 0.649
LYPD3
LY6/PLAUR domain containing 3.
   
  
 0.563
ENSFCAP00000059874
IF rod domain-containing protein; Belongs to the intermediate filament family.
 
 0.507
KRTAP3-1
Keratin associated protein 3-1.
   
 
 0.486
LOR
Uncharacterized protein.
   
 0.473
RANBP2
RAN binding protein 2.
   
 0.468
CCDC113
Coiled-coil domain containing 113.
   
  
 0.461
KDM6B
Lysine demethylase 6B.
   
 0.444
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.