STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL1LHFPL tetraspan subfamily member 1. (284 aa)    
Predicted Functional Partners:
ALG13
Uncharacterized protein.
   
  
 0.663
ENSFCAP00000028774
Glyco_tran_28_C domain-containing protein.
      
 0.655
AMOT
Angiomotin.
   
  
 0.551
TRPC5
Transient receptor potential cation channel subfamily C member 5; Belongs to the transient receptor (TC 1.A.4) family.
      
 0.516
SLCO6A1
Solute carrier organic anion transporter family member.
   
  
 0.467
CLCA2
Chloride channel accessory 2.
     
 0.464
RTL4
Retrotransposon Gag like 4.
   
  
 0.459
VSIG10
V-set and immunoglobulin domain containing 10.
      
 0.455
GLYATL3
Glycine-N-acyltransferase like 3.
      
 0.455
LYPLAL1
Lysophospholipase like 1.
      
 0.455
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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