STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH7AlkB homolog 7. (336 aa)    
Predicted Functional Partners:
ALKBH6
Uncharacterized protein.
   
  
 0.695
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
  
 0.678
NDUFB7
NADH:ubiquinone oxidoreductase subunit B7.
   
    0.672
MRPS34
Mitochondrial ribosomal protein S34.
   
    0.672
ALKBH4
AlkB homolog 4, lysine demethylase.
   
  
 0.655
ALKBH2
AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase.
      
 0.652
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.640
NR6A1
Nuclear receptor subfamily 6 group A member 1.
      
 0.630
TRMT2B
tRNA methyltransferase 2 homolog B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
      
 0.615
SAMD10
Sterile alpha motif domain containing 10.
      
 0.613
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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