Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
CE3H16orf54Chromosome E3 C16orf54 homolog. (212 aa)    
Predicted Functional Partners:
ASPHD1
Aspartate beta-hydroxylase domain containing 1.
      
 0.769
QPRT
Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Involved in the catabolism of quinolinic acid (QA). Belongs to the NadC/ModD family.
      
 0.741
YPEL3
Yippee like 3.
      
 0.645
LOC101095538
Jacalin-type lectin domain-containing protein.
      
 0.554
CHTOP
Uncharacterized protein.
      
 0.547
PUM2
Pumilio RNA binding family member 2.
      
 0.546
CDIPT
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.543
STRADB
STE20 related adaptor beta.
      
 0.522
ASPHD2
Aspartate beta-hydroxylase domain containing 2.
      
 0.501
YPEL4
Protein yippee-like; Belongs to the yippee family.
      
 0.480
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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