| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ARHGEF11 | RPAP1 | ENSFCAP00000060121 | ENSFCAP00000011706 | Rho guanine nucleotide exchange factor 11. | RNA polymerase II associated protein 1. | 0.612 |
| GOLGA3 | RNF20 | ENSFCAP00000002306 | ENSFCAP00000001317 | Golgin A3. | E3 ubiquitin protein ligase; Belongs to the BRE1 family. | 0.606 |
| GOLGA3 | RPAP1 | ENSFCAP00000002306 | ENSFCAP00000011706 | Golgin A3. | RNA polymerase II associated protein 1. | 0.589 |
| GPN1 | GPN2 | ENSFCAP00000048017 | ENSFCAP00000011888 | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.930 |
| GPN1 | GPN3 | ENSFCAP00000048017 | ENSFCAP00000048102 | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.907 |
| GPN1 | POLR2M | ENSFCAP00000048017 | ENSFCAP00000047531 | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | RNA polymerase II subunit M. | 0.576 |
| GPN1 | RPAP1 | ENSFCAP00000048017 | ENSFCAP00000011706 | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | RNA polymerase II associated protein 1. | 0.585 |
| GPN2 | GPN1 | ENSFCAP00000011888 | ENSFCAP00000048017 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | 0.930 |
| GPN2 | GPN3 | ENSFCAP00000011888 | ENSFCAP00000048102 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.528 |
| GPN2 | POLR2L | ENSFCAP00000011888 | ENSFCAP00000050390 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | RNA polymerase II subunit L. | 0.812 |
| GPN2 | POLR2M | ENSFCAP00000011888 | ENSFCAP00000047531 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | RNA polymerase II subunit M. | 0.533 |
| GPN2 | RPAP1 | ENSFCAP00000011888 | ENSFCAP00000011706 | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | RNA polymerase II associated protein 1. | 0.875 |
| GPN3 | GPN1 | ENSFCAP00000048102 | ENSFCAP00000048017 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import. | 0.907 |
| GPN3 | GPN2 | ENSFCAP00000048102 | ENSFCAP00000011888 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.528 |
| GPN3 | POLR2L | ENSFCAP00000048102 | ENSFCAP00000050390 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | RNA polymerase II subunit L. | 0.814 |
| GPN3 | POLR2M | ENSFCAP00000048102 | ENSFCAP00000047531 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | RNA polymerase II subunit M. | 0.506 |
| GPN3 | RPAP1 | ENSFCAP00000048102 | ENSFCAP00000011706 | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | RNA polymerase II associated protein 1. | 0.692 |
| NDUFAF1 | RPAP1 | ENSFCAP00000011702 | ENSFCAP00000011706 | NADH:ubiquinone oxidoreductase complex assembly factor 1. | RNA polymerase II associated protein 1. | 0.652 |
| POLR2L | GPN2 | ENSFCAP00000050390 | ENSFCAP00000011888 | RNA polymerase II subunit L. | GPN-loop GTPase 2; Small GTPase required for proper localization of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.812 |
| POLR2L | GPN3 | ENSFCAP00000050390 | ENSFCAP00000048102 | RNA polymerase II subunit L. | GPN-loop GTPase 3; Small GTPase required for proper nuclear import of RNA polymerase II and III (RNAPII and RNAPIII). May act at an RNAP assembly step prior to nuclear import; Belongs to the GPN-loop GTPase family. | 0.814 |