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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TET1Tet methylcytosine dioxygenase 1. (2142 aa)    
Predicted Functional Partners:
DNMT1
DNA (cytosine-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
      
 0.685
OGT
O-linked N-acetylglucosamine (GlcNAc) transferase.
   
 
 0.671
TDG
Thymine DNA glycosylase.
      
 0.664
DNMT3L
Uncharacterized protein.
    
 
 0.658
NANOG
Nanog homeobox.
   
 
 0.595
LOC101084379
Homeobox domain-containing protein.
   
 
 0.595
GADD45B
Growth arrest and DNA damage inducible beta.
      
 0.548
ALKBH1
AlkB homolog 1, histone H2A dioxygenase.
      
 0.537
POU5F1
POU domain protein.
    
 
 0.527
UHRF1
Ubiquitin like with PHD and ring finger domains 1.
      
 0.519
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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