STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHCBP1LSHC binding and spindle associated 1 like. (658 aa)    
Predicted Functional Partners:
SPATA3
Spermatogenesis associated 3.
      
 0.735
RACGAP1
Rac GTPase activating protein 1.
   
 
 0.700
NCAPG
Non-SMC condensin I complex subunit G.
   
  
 0.678
TNPO2
Transportin 2.
      
 0.643
HSPA2
Heat shock protein family A (Hsp70) member 2; Belongs to the heat shock protein 70 family.
      
 0.637
PDCL2
Phosducin like 2.
      
 0.632
DKKL1
Dickkopf like acrosomal protein 1.
      
 0.625
CABS1
Calcium binding protein, spermatid associated 1.
      
 0.610
CHDH
Choline dehydrogenase.
      
 0.604
FMR1
Fragile X mental retardation 1.
      
 0.604
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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