STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH3G-patch domain containing 3. (520 aa)    
Predicted Functional Partners:
ZNF408
Zinc finger protein 408.
   
    0.924
PLEKHA8
Pleckstrin homology domain containing A8.
   
  
 0.641
ARL2BP
Ring finger and SPRY domain containing 1.
      
 0.622
EFCAB1
EF-hand calcium binding domain 1.
      
 0.609
SNX20
Sorting nexin 20.
      
 0.589
EAF1
ELL associated factor 1.
      
 0.589
CDK14
Cyclin dependent kinase 14; Belongs to the protein kinase superfamily.
      
 0.576
DNAJC5
DnaJ heat shock protein family (Hsp40) member C5.
      
 0.549
SLC25A24
Solute carrier family 25 member 24; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.543
ENSFCAP00000055205
Uncharacterized protein.
   
  
 0.543
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.