STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP21Matrix metallopeptidase 21. (560 aa)    
Predicted Functional Partners:
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.655
PKD1L1
Polycystin 1 like 1, transient receptor potential channel interacting.
  
 
 
 0.597
DRC7
Dynein regulatory complex subunit 7.
      
 0.586
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.571
CCDC63
Coiled-coil domain containing 63.
      
 0.560
LRFN2
Leucine rich repeat and fibronectin type III domain containing 2.
    
 0.541
SH3KBP1
SH3 domain containing kinase binding protein 1.
      
 0.516
TIMP1
TIMP metallopeptidase inhibitor 1.
   
 0.510
TWSG1
Twisted gastrulation BMP signaling modulator 1.
      
 0.476
SPAG1
Sperm associated antigen 1.
      
 0.471
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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