STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VAT1Vesicle amine transport 1. (391 aa)    
Predicted Functional Partners:
MAPT
Microtubule-associated protein.
    
   0.586
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.549
GCAT
Glycine C-acetyltransferase.
   
 0.534
UBLCP1
Ubiquitin like domain containing CTD phosphatase 1.
   
 
 0.530
MECR
Mitochondrial trans-2-enoyl-CoA reductase.
  
   
0.489
BCAS1
Breast carcinoma amplified sequence 1.
      
 0.482
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
   
 0.481
PTGR2
Uncharacterized protein.
  
 0.452
PTGR1
Prostaglandin reductase 1.
  
 0.452
FASN
Fatty acid synthase.
  
 0.451
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.