STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG16L2Autophagy related 16 like 2. (617 aa)    
Predicted Functional Partners:
ATG12
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
    
 0.995
ATG5
Autophagy protein 5; Involved in autophagic vesicle formation.
   
 0.995
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 0.986
RAB33B
Uncharacterized protein.
    
 0.974
RB1CC1
RB1 inducible coiled-coil 1.
   
 0.964
ATG3
Autophagy-related protein 3.
   
 0.914
ATG16L1
Autophagy related 16 like 1.
  
 
 
0.912
WIPI2
WD repeat domain, phosphoinositide interacting 2.
   
 0.824
ULK3
Unc-51 like kinase 3; Belongs to the protein kinase superfamily.
    
 
 0.776
ULK2
Unc-51 like autophagy activating kinase 2.
    
 
 0.747
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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