Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ABCF2ATP binding cassette subfamily F member 2. (700 aa)    
Predicted Functional Partners:
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.944
EIF5B
Eukaryotic translation initiation factor 5B.
  
 
 0.829
ACAD9
Acyl-CoA dehydrogenase family member 9.
   
   0.803
ABCG5
ATP binding cassette subfamily G member 5.
    
 
 0.735
POLR1A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
    0.734
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.714
PA2G4
Proliferation-associated 2G4.
  
 
 0.711
GNL1
G protein nucleolar 1 (putative).
   
 
 0.693
ZC3H15
Zinc finger CCCH-type containing 15.
 
 
   0.692
STIP1
Stress induced phosphoprotein 1.
   
 
 0.689
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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