STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LINGO1Leucine rich repeat and Ig domain containing 1. (649 aa)    
Predicted Functional Partners:
NGFR
Nerve growth factor receptor.
    
 0.907
MAG
Myelin associated glycoprotein.
   
 0.880
RTN4
Reticulon.
   
 0.834
OMG
Oligodendrocyte myelin glycoprotein.
     
0.733
RHOA
Ras homolog family member A.
    
 0.686
RASGEF1B
RasGEF domain family member 1B.
   
  
 0.626
RTN1
Reticulon.
   
 0.623
RTN4R
Reticulon 4 receptor.
  
 
0.590
ADGRL3
Adhesion G protein-coupled receptor L3; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.587
ADGRL2
Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.
    
   0.586
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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