STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIPARPTCDD inducible poly(ADP-ribose) polymerase. (692 aa)    
Predicted Functional Partners:
RNF114
Ring finger protein 114.
    
  0.757
ZFAND5
Zinc finger AN1-type containing 5.
   
  
 0.629
PARP1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 
 0.622
KDM2B
Lysine demethylase 2B.
    
 0.597
AHRR
Uncharacterized protein.
   
  
 0.570
HABP4
Hyaluronan binding protein 4.
    
 
 0.552
TSHZ3
Teashirt zinc finger homeobox 3.
      
 0.539
PBK
PDZ binding kinase.
    
 0.484
MKLN1
Muskelin 1.
      
 0.483
GPRC5B
G protein-coupled receptor class C group 5 member B.
      
 0.480
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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