STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CA3H20orf194Chromosome A3 C20orf194 homolog. (1177 aa)    
Predicted Functional Partners:
FAM168A
Uncharacterized protein.
   
  
 0.649
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
      
 0.642
TTBK1
Tau tubulin kinase 1.
      
 0.635
NRIP2
Nuclear receptor interacting protein 2.
      
 0.616
VPS26A
VPS26, retromer complex component A.
      
 0.612
RADIL
Rap associating with DIL domain.
      
 0.577
CDV3
CDV3 homolog.
      
 0.577
GIGYF2
GRB10 interacting GYF protein 2.
      
 0.577
PITPNC1
Phosphatidylinositol transfer protein cytoplasmic 1.
      
 0.577
PCDHGA4
Protocadherin gamma subfamily A, 4.
      
 0.577
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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