STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM83BFamily with sequence similarity 83 member B. (1011 aa)    
Predicted Functional Partners:
TTC6
TPR_REGION domain-containing protein.
      
 0.778
CSNK1A1
Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.
    
 
 0.775
GFRAL
GDNF family receptor alpha like.
      
 0.761
ZNF451
Zinc finger protein 451.
      
 0.757
REC114
REC114 meiotic recombination protein.
      
 0.757
PRIM2
DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.
      
 0.728
STXBP6
Syntaxin binding protein 6.
      
 0.710
RNF144B
RBR-type E3 ubiquitin transferase.
      
 0.707
VRK3
VRK serine/threonine kinase 3.
    
 
 0.671
ANLN
Anillin actin binding protein.
    
 
 0.663
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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