Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
UPK3BUroplakin 3B. (281 aa)    
Predicted Functional Partners:
UPK1B
Tetraspanin.
   
  
 0.794
UPK2
Uroplakin 2.
      
 0.726
LRRN4
Leucine rich repeat neuronal 4.
   
  
 0.723
UPK1A
Uroplakin 1A; Belongs to the tetraspanin (TM4SF) family.
   
  
 0.695
KANK3
KN motif and ankyrin repeat domains 3.
      
 0.594
DTYMK
Deoxythymidylate kinase.
      
 0.559
WAS
WASP actin nucleation promoting factor.
      
 0.559
MNAT1
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
      
 0.549
TCF21
Transcription factor 21.
   
  
 0.542
VAT1L
Vesicle amine transport 1 like.
      
 0.502
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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