STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRTGProtogenin. (1200 aa)    
Predicted Functional Partners:
TFCP2L1
Transcription factor CP2 like 1.
     
 0.790
LRFN2
Leucine rich repeat and fibronectin type III domain containing 2.
    
 0.737
IGSF11
Immunoglobulin superfamily member 11.
      
 0.535
GUCY1A2
Guanylate cyclase 1 soluble subunit alpha 2; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
    
 
 0.532
INKA2
Inka box actin regulator 2.
    
 
 0.529
CFAP299
Cilia and flagella associated protein 299.
      
 0.526
FARP1
FERM, ARH/RhoGEF and pleckstrin domain protein 1.
     
 0.503
PARD3B
Par-3 family cell polarity regulator beta.
    
 0.479
ZNF280D
Zinc finger protein 280D.
     
 0.461
KDM4C
Lysine demethylase 4C.
      
 0.455
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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