STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LETM2Leucine zipper and EF-hand containing transmembrane protein 2. (491 aa)    
Predicted Functional Partners:
RHBDD3
Rhomboid domain containing 3.
      
 0.787
FAM118A
Family with sequence similarity 118 member A.
    
 
 0.786
DNAJC18
DnaJ heat shock protein family (Hsp40) member C18.
   
 
 0.773
REEP6
Receptor expression-enhancing protein.
      
 0.713
RAB11FIP1
RAB11 family interacting protein 1.
    
 
 0.707
BRF2
BRF2 RNA polymerase III transcription initiation factor subunit.
      
 0.698
GPAT2
Glycerol-3-phosphate acyltransferase 2, mitochondrial.
      
 0.663
PLD6
Phospholipase D family member 6.
      
 0.659
GOT1L1
Glutamic-oxaloacetic transaminase 1 like 1.
    
 
 0.650
BBS9
Bardet-Biedl syndrome 9.
      
 0.639
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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