STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG13Autophagy-related protein 13; Belongs to the ATG13 family. Metazoan subfamily. (550 aa)    
Predicted Functional Partners:
ULK2
Unc-51 like autophagy activating kinase 2.
   
 0.999
RB1CC1
RB1 inducible coiled-coil 1.
    
 0.999
ULK1
Unc-51 like autophagy activating kinase 1.
   
 0.999
ATG101
Autophagy related 101.
    
 0.999
ATG14
Autophagy related 14.
   
 0.989
MTOR
Serine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family.
     
 0.983
CD4H9orf72
Chromosome D4 C9orf72 homolog.
  
 
 0.980
RPTOR
Regulatory associated protein of MTOR complex 1.
    
 0.975
MLST8
MTOR associated protein, LST8 homolog.
     
 0.971
ATG9A
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
   
 0.965
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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