Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP1Rho GTPase activating protein 1. (449 aa)    
Predicted Functional Partners:
CDC42
Uncharacterized protein.
    
 0.927
CDC42-2
Uncharacterized protein.
    
 0.927
RHOA
Ras homolog family member A.
    
 0.920
BNIP2
BCL2 interacting protein 2.
    
 0.875
PRR5
Proline rich 5.
 
   
 0.711
RHOF
Ras homolog family member F, filopodia associated.
    
 0.703
RND1
Rho family GTPase 1.
    
 0.700
RND3
Rho family GTPase 3.
    
 0.700
ATCAY
ATCAY kinesin light chain interacting caytaxin.
    
 0.683
RND2
Rho family GTPase 2.
    
 0.650
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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