STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYCE1Synaptonemal complex central element protein 1. (331 aa)    
Predicted Functional Partners:
SYCE3
Synaptonemal complex central element protein 3.
    
 0.975
HORMAD1
HORMA domain containing 1.
      
 0.893
TEX12
Testis expressed 12.
     
 0.855
MEI1
Meiotic double-stranded break formation protein 1.
      
 0.841
STAG3
Stromal antigen 3.
     
 0.824
SYCP1
Synaptonemal complex protein 1.
    
 0.816
REC8
REC8 meiotic recombination protein.
     
 0.809
SPO11
SPO11 initiator of meiotic double stranded breaks.
      
 0.791
MSH4
DNA_MISMATCH_REPAIR_2 domain-containing protein.
      
 0.705
XRCC2
X-ray repair cross complementing 2.
      
 0.689
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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