Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL1Mitochondrial ribosomal protein L1. (325 aa)    
Predicted Functional Partners:
MRPL52
Mitochondrial ribosomal protein L52.
   
 
 0.970
MRPL39
Mitochondrial ribosomal protein L39.
   
 
 0.968
MRPL4
Mitochondrial ribosomal protein L4.
  
 0.965
MRPL10
Mitochondrial ribosomal protein L10.
   
 
 0.959
MRPS30
Mitochondrial ribosomal protein S30.
   
 
 0.957
MRPL12
Mitochondrial ribosomal protein L12.
  
 
 0.956
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.955
MRPL13
Mitochondrial ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.
  
 0.944
MRPL27
Mitochondrial ribosomal protein L27.
  
 
 0.940
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.938
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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