STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM1ALysine demethylase 1A. (944 aa)    
Predicted Functional Partners:
RCOR1
REST corepressor 1.
   
 0.999
H3F3A
Histone H3; Belongs to the histone H3 family.
    
 0.991
PHF21A
PHD finger protein 21A.
   
 0.986
HMG20B
High mobility group 20B.
   
 0.963
REST
RE1 silencing transcription factor.
    
 0.953
KDM4A
Lysine demethylase 4A.
   
 0.929
RCOR2
REST corepressor 2.
   
 0.885
RCOR3
REST corepressor 3.
   
 0.885
H2AW
Histone H2A; Belongs to the histone H2A family.
    
 0.883
HDAC2
Histone deacetylase 2.
   
 0.882
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.