STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPTSSBSerine palmitoyltransferase small subunit B. (76 aa)    
Predicted Functional Partners:
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
    
 0.937
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
    
 0.916
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
    
 0.848
SPTSSA
Serine palmitoyltransferase small subunit A.
  
  
0.789
LCLAT1
Lysocardiolipin acyltransferase 1.
      
 0.757
ST8SIA6
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6; Belongs to the glycosyltransferase 29 family.
      
 0.698
TAF1D
TATA-box binding protein associated factor, RNA polymerase I subunit D.
      
 0.687
KCNK4
Potassium two pore domain channel subfamily K member 4; Belongs to the two pore domain potassium channel (TC 1.A.1.8) family.
      
 0.642
ORMDL3
ORM1-like protein; Negative regulator of sphingolipid synthesis.
     
 0.624
ORMDL2
ORM1-like protein; Negative regulator of sphingolipid synthesis.
     
 0.624
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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