STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC1AStructural maintenance of chromosomes protein. (1233 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes protein.
   
0.999
RAD21
RAD21 cohesin complex component.
   
 0.999
STAG2
Stromal antigen 2.
   
 0.999
STAG1
Stromal antigen 1.
   
 0.999
NIPBL
Nipped-B protein.
   
 0.998
ESPL1
Extra spindle pole bodies like 1, separase.
   
 0.977
STAG3
Stromal antigen 3.
   
 0.974
RAD21L1
RAD21 cohesin complex component like 1.
   
 0.970
SMC1B
Structural maintenance of chromosomes protein.
  
 
0.955
PDS5A
PDS5 cohesin associated factor A.
   
 0.951
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.