STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIBC1RIB43A domain with coiled-coils 1. (378 aa)    
Predicted Functional Partners:
CYLC1
Cylicin 1.
    
 
 0.782
DYNLT3
Dynein light chain Tctex-type 3.
   
 0.753
PIH1D3
PIH1 domain containing 3.
   
  
 0.752
ZNF407
Zinc finger protein 407.
    
 0.689
MORN5
MORN repeat containing 5.
   
 
 0.676
TEKT2
Tektin 2.
   
 
 0.668
ERAL1
Era like 12S mitochondrial rRNA chaperone 1.
      
 0.662
TEKT3
Tektin 3.
   
 
 0.656
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.649
ARHGEF10L
Rho guanine nucleotide exchange factor 10 like.
    
 
 0.631
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.