STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQSEC1IQ motif and Sec7 domain 1. (1057 aa)    
Predicted Functional Partners:
ARF6
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.769
TMCO5A
Transmembrane and coiled-coil domains 5A.
      
 0.726
NCOA7
Nuclear receptor coactivator 7.
      
 0.694
CALN1
Uncharacterized protein.
    
 
 0.572
TMEM236
Transmembrane protein 236.
      
 0.544
RBMS3
RNA binding motif single stranded interacting protein 3.
      
 0.542
ZBTB5
Zinc finger and BTB domain containing 5.
      
 0.532
TBC1D25
TBC1 domain family member 25.
      
 0.515
MAU2
MAU2 sister chromatid cohesion factor.
   
  
 0.508
PIPOX
Pipecolic acid and sarcosine oxidase.
      
 0.489
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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