STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMCO2Transmembrane and coiled-coil domains 2. (192 aa)    
Predicted Functional Partners:
GALNTL5
Polypeptide N-acetylgalactosaminyltransferase like 5.
   
  
 0.527
CCDC187
Uncharacterized protein.
      
 0.524
FAM71F1
Family with sequence similarity 71 member F1.
      
 0.524
CT83
Uncharacterized protein.
      
 0.519
FAM81B
Family with sequence similarity 81 member B.
      
 0.519
CABS1
Calcium binding protein, spermatid associated 1.
      
 0.503
PROCA1
Protein interacting with cyclin A1.
      
 0.497
TMCO5A
Transmembrane and coiled-coil domains 5A.
      
 0.495
PIH1D2
PIH1 domain containing 2.
      
 0.491
CFAP206
Uncharacterized protein.
      
 0.485
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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