Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP19Matrix metallopeptidase 19. (513 aa)    
Predicted Functional Partners:
NID1
Nidogen 1.
   
 
 0.787
TNFAIP6
TNF alpha induced protein 6.
   
 0.692
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.642
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.605
ANGPTL4
Angiopoietin like 4.
   
 0.586
TIMP1
TIMP metallopeptidase inhibitor 1.
   
 0.558
CMAS
Cytidine monophosphate N-acetylneuraminic acid synthetase.
      
 0.548
NID2
Nidogen 2.
   
 
 0.472
NTN1
Netrin 1.
      
 0.463
PCSK4
Proprotein convertase subtilisin/kexin type 4; Belongs to the peptidase S8 family.
    
 0.456
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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