STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP19Matrix metallopeptidase 19. (513 aa)    
Predicted Functional Partners:
NID1
Nidogen 1.
     
 0.877
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.669
DNAJC14
J domain-containing protein.
      
 0.632
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.565
TIMP1
TIMP metallopeptidase inhibitor 1.
   
 0.525
PRND
Prion like protein doppel.
      
 0.518
HPN
Hepsin; Belongs to the peptidase S1 family.
   
 0.507
SPATA6
Spermatogenesis associated 6.
      
 0.483
CDC14B
Uncharacterized protein.
      
 0.465
MMP11
Matrix metallopeptidase 11.
  
 
0.458
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.