STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDLIM4PDZ and LIM domain 4. (330 aa)    
Predicted Functional Partners:
EHBP1
EH domain binding protein 1.
   
 0.636
PDLIM5
PDZ and LIM domain 5.
     
0.621
SH2B2
SH2B adaptor protein 2.
    
 
 0.619
PDLIM2
PDZ and LIM domain 2.
     
0.604
NUDT14
Nudix hydrolase 14.
      
 0.603
FAM214B
Family with sequence similarity 214 member B.
      
 0.598
PRICKLE4
Uncharacterized protein.
   
 0.585
C2CD5
C2 calcium dependent domain containing 5.
      
 0.574
PDLIM7
PDZ and LIM domain 7.
     
0.564
LIMK2
LIM domain kinase 2.
    
 0.562
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.