STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPHD1Aspartate beta-hydroxylase domain containing 1. (367 aa)    
Predicted Functional Partners:
SEZ6L2
Seizure related 6 homolog like 2.
 
 
  
 0.819
CE3H16orf54
Chromosome E3 C16orf54 homolog.
      
 0.799
CDIPT
CDP-diacylglycerol--inositol 3-phosphatidyltransferase.
      
 0.681
KCTD13
Potassium channel tetramerization domain containing 13.
      
 0.672
ENSFCAP00000051698
Uncharacterized protein.
      
 0.672
YPEL3
Yippee like 3.
      
 0.607
PDZD9
PDZ domain containing 9.
      
 0.590
DOC2A
Double C2 domain alpha.
   
  
 0.567
C16orf92
Chromosome 16 open reading frame 92.
      
 0.565
TLCD3B
TLC domain ceramide synthase 3B.
      
 0.562
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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