STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPUSD3RNA pseudouridine synthase D3. (352 aa)    
Predicted Functional Partners:
PUS7L
Pseudouridine synthase 7 like.
    
 
 0.848
NGRN
Neugrin, neurite outgrowth associated.
    
 
 0.813
PUS7
Pseudouridine synthase 7.
    
 
 0.808
FASTKD2
FAST kinase domains 2.
   
 
 0.800
MRPL47
Mitochondrial ribosomal protein L47.
    
 
 0.782
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
  
 
 0.771
MTG1
Mitochondrial GTPase 1; Plays a role in the regulation of the mitochondrial ribosome assembly and of translational activity. Displays mitochondrial GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.
  
 
 0.770
MRM1
Mitochondrial rRNA methyltransferase 1.
  
 
 0.759
MRM3
Mitochondrial rRNA methyltransferase 3.
  
 
 0.756
PUS1
Pseudouridine synthase 1.
  
  
 0.749
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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