STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDHR3Cadherin related family member 3. (882 aa)    
Predicted Functional Partners:
LDLRAD1
Low density lipoprotein receptor class A domain containing 1.
    
 
 0.741
TXLNB
Taxilin beta.
      
 0.731
VPS9D1
VPS9 domain containing 1.
      
 0.716
SHISA8
Shisa family member 8.
      
 0.714
ASB3
Ankyrin repeat and SOCS box containing 3.
    
 0.659
PIFO
Uncharacterized protein.
      
 0.622
POLR3A
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.588
SNTN
Sentan, cilia apical structure protein.
   
  
 0.571
NR2F6
Nuclear receptor subfamily 2 group F member 6.
      
 0.562
ENSFCAP00000057050
Gasdermin domain-containing protein.
      
 0.538
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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