STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TGM3TGc domain-containing protein. (744 aa)    
Predicted Functional Partners:
SALL4
Spalt like transcription factor 4.
      
 0.760
PDCD5
Programmed cell death 5.
      
 0.704
SEMA3B
Semaphorin 3B; Belongs to the semaphorin family.
      
 0.704
UVRAG
UV radiation resistance associated.
      
 0.703
GPRC5C
G protein-coupled receptor class C group 5 member C.
     
 0.648
KLK14
Kallikrein related peptidase 14; Belongs to the peptidase S1 family.
   
 
 0.608
CDSN
Corneodesmosin.
      
 0.593
CNFN
Cornifelin.
   
  
 0.551
SERPINB12
Serpin family B member 12; Belongs to the serpin family.
   
 0.495
SGK2
Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily.
      
 0.483
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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