STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATP13A1Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily. (1204 aa)    
Predicted Functional Partners:
PELO
Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
      
 0.660
DNAH1
Dynein axonemal heavy chain 1.
      
 0.640
PCNX3
Pecanex 3.
   
    0.621
NHLRC2
NHL repeat containing 2.
    
 
 0.608
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1.
   
 
 0.565
RMDN3
Regulator of microtubule dynamics 3.
     
 0.556
SGSM3
Small G protein signaling modulator 3.
      
 0.554
BRPF1
Bromodomain and PHD finger containing 1.
   
  
 0.552
NAA30
N(alpha)-acetyltransferase 30, NatC catalytic subunit.
    
 
 0.539
ARHGEF1
Rho guanine nucleotide exchange factor 1.
   
  
 0.527
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.