Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RBM5RNA binding motif protein 5. (815 aa)    
Predicted Functional Partners:
SUGP1
SURP and G-patch domain containing 1.
   
 0.925
RBM39
RNA binding motif protein 39.
   
 0.855
PPP1R8
Protein phosphatase 1 regulatory subunit 8.
   
 
 0.791
RBM25
RNA binding motif protein 25.
   
 
 0.788
SRRM2
Serine/arginine repetitive matrix 2.
   
 
 0.785
DDX5
DEAD-box helicase 5; Belongs to the DEAD box helicase family.
   
 0.783
SF3B4
Splicing factor 3b subunit 4.
    
 
 0.779
HTATSF1
HIV-1 Tat specific factor 1.
   
 
 0.763
DHX15
DEAH-box helicase 15.
   
 0.759
SRRT
Serrate, RNA effector molecule.
   
 
  0.756
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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