STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAGAPT cell activation RhoGTPase activating protein. (754 aa)    
Predicted Functional Partners:
RIPOR3
RIPOR family member 3.
   
  
 0.768
HSD17B11
Hydroxysteroid 17-beta dehydrogenase 11; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
  
 0.689
SNTA1
Syntrophin alpha 1.
    
   0.579
RSPH3
Radial spoke head 3.
   
  
 0.566
GJD4
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
   
  
 0.561
SNTB1
Syntrophin beta 1.
    
   0.560
SPINK4
Serine peptidase inhibitor, Kazal type 4.
      
 0.557
LTC4S
Leukotriene C4 synthase.
      
 0.544
SH2B3
SH2B adaptor protein 3.
      
 0.534
SNTB2
Syntrophin beta 2.
    
   0.530
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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