Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMCD1LIM and cysteine rich domains 1. (362 aa)    
Predicted Functional Partners:
GATA6
GATA binding protein 6.
    
 0.944
GATA3
GATA binding protein 3.
    
 0.736
VSTM2B
V-set and transmembrane domain containing 2B.
      
 0.645
GATA5
GATA binding protein 5.
    
 0.623
GATA4
GATA binding protein 4.
    
 0.623
HAAO
3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.
      
 0.619
SMURF2
E3 ubiquitin-protein ligase.
    
  0.601
TMEM150C
Transmembrane protein 150C.
      
 0.576
DHRS7C
Dehydrogenase/reductase 7C; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.574
FXYD7
FXYD domain-containing ion transport regulator; Belongs to the FXYD family.
      
 0.573
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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