STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STX5Syntaxin 5; Belongs to the syntaxin family. (355 aa)    
Predicted Functional Partners:
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
   
 0.999
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
   
 0.999
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
    
 0.998
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.998
BET1
Bet1 golgi vesicular membrane trafficking protein.
   
 0.998
ENSFCAP00000049122
t-SNARE coiled-coil homology domain-containing protein.
   
 0.992
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.991
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.989
VAMP8
Vesicle associated membrane protein 8.
    
 0.987
USO1
USO1 vesicle transport factor.
    
 0.987
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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