SNX12 protein (Felis catus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

SNX12

Sorting nexin 12. (262 aa)

Predicted Functional Partners:

VPS35

0.911

VPS29

0.888

VPS26A

0.877

VPS26B

0.815

ENSFCAP00000029952

0.783

SNX3

0.783

WLS

0.735

SNX5

0.660

RAB7A

0.622

ENSFCAP00000038726

0.622

Your Current Organism:

Felis catus

NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSFCAP00000029952	ENSFCAP00000038726	ENSFCAP00000029952	ENSFCAP00000038726	PX domain-containing protein.	Uncharacterized protein.	0.622
ENSFCAP00000029952	RAB7A	ENSFCAP00000029952	ENSFCAP00000016922	PX domain-containing protein.	Uncharacterized protein.	0.622
ENSFCAP00000029952	SNX12	ENSFCAP00000029952	ENSFCAP00000013727	PX domain-containing protein.	Sorting nexin 12.	0.783
ENSFCAP00000029952	SNX5	ENSFCAP00000029952	ENSFCAP00000050614	PX domain-containing protein.	Sorting nexin 5.	0.694
ENSFCAP00000029952	VPS26A	ENSFCAP00000029952	ENSFCAP00000025020	PX domain-containing protein.	VPS26, retromer complex component A.	0.877
ENSFCAP00000029952	VPS26B	ENSFCAP00000029952	ENSFCAP00000038770	PX domain-containing protein.	VPS26, retromer complex component B.	0.841
ENSFCAP00000029952	VPS29	ENSFCAP00000029952	ENSFCAP00000045788	PX domain-containing protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.901
ENSFCAP00000029952	VPS35	ENSFCAP00000029952	ENSFCAP00000038222	PX domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.930
ENSFCAP00000029952	WLS	ENSFCAP00000029952	ENSFCAP00000011657	PX domain-containing protein.	Wnt ligand secretion mediator.	0.735
ENSFCAP00000038726	ENSFCAP00000029952	ENSFCAP00000038726	ENSFCAP00000029952	Uncharacterized protein.	PX domain-containing protein.	0.622
ENSFCAP00000038726	SNX12	ENSFCAP00000038726	ENSFCAP00000013727	Uncharacterized protein.	Sorting nexin 12.	0.622
ENSFCAP00000038726	SNX3	ENSFCAP00000038726	ENSFCAP00000044069	Uncharacterized protein.	PX domain-containing protein.	0.622
ENSFCAP00000038726	SNX5	ENSFCAP00000038726	ENSFCAP00000050614	Uncharacterized protein.	Sorting nexin 5.	0.508
ENSFCAP00000038726	VPS26A	ENSFCAP00000038726	ENSFCAP00000025020	Uncharacterized protein.	VPS26, retromer complex component A.	0.833
ENSFCAP00000038726	VPS26B	ENSFCAP00000038726	ENSFCAP00000038770	Uncharacterized protein.	VPS26, retromer complex component B.	0.647
ENSFCAP00000038726	VPS29	ENSFCAP00000038726	ENSFCAP00000045788	Uncharacterized protein.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.853
ENSFCAP00000038726	VPS35	ENSFCAP00000038726	ENSFCAP00000038222	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.843
RAB7A	ENSFCAP00000029952	ENSFCAP00000016922	ENSFCAP00000029952	Uncharacterized protein.	PX domain-containing protein.	0.622
RAB7A	SNX12	ENSFCAP00000016922	ENSFCAP00000013727	Uncharacterized protein.	Sorting nexin 12.	0.622
RAB7A	SNX3	ENSFCAP00000016922	ENSFCAP00000044069	Uncharacterized protein.	PX domain-containing protein.	0.622