Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RIC1RIC1 homolog, RAB6A GEF complex partner 1. (1405 aa)    
Predicted Functional Partners:
RGP1
RGP1 homolog, RAB6A GEF complex partner 1.
    
 0.993
RAB33B
Uncharacterized protein.
    
 0.925
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.910
RAB6B
RAB6B, member RAS oncogene family.
   
 0.864
RAB6A
RAB6A, member RAS oncogene family.
   
 0.864
AVL9
AVL9 cell migration associated.
      
 0.825
ARFRP1
ADP ribosylation factor related protein 1.
    
 0.817
COG7
Component of oligomeric golgi complex 7.
     
 0.813
COG5
Component of oligomeric golgi complex 5.
     
 0.809
RAB34
Uncharacterized protein.
   
 0.782
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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