STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC18Coiled-coil domain containing 18. (1481 aa)    
Predicted Functional Partners:
KLHDC8A
Kelch domain containing 8A.
      
 0.671
TMEM71
Transmembrane protein 71.
      
 0.622
PRADC1
Protease associated domain containing 1.
      
 0.609
CCDC14
Coiled-coil domain containing 14.
   
 
 0.603
PRSS37
Serine protease 37.
      
 0.591
RAB42
RAB42, member RAS oncogene family.
    
 0.564
ABCD3
ATP binding cassette subfamily D member 3.
      
 0.547
SFXN4
Sideroflexin 4.
      
 0.538
SLC44A5
Solute carrier family 44 member 5; Belongs to the CTL (choline transporter-like) family.
      
 0.521
TULP2
Tubby-like protein; Belongs to the TUB family.
      
 0.491
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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