STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KDM4ALysine demethylase 4A. (1067 aa)    
Predicted Functional Partners:
KDM1A
Lysine demethylase 1A.
   
 0.929
KDM3A
Lysine demethylase 3A.
     
 0.803
KDM3B
Lysine demethylase 3B.
     
 0.751
KDM6B
Lysine demethylase 6B.
   
 
 0.654
KDM4B
Lysine demethylase 4B.
  
 
0.653
KDM2B
Lysine demethylase 2B.
    
 
 0.645
JMJD6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
      
 0.601
KDM6A
Lysine demethylase 6A.
   
 
 0.598
TP53BP1
Tumor protein p53 binding protein 1.
     
 0.585
NSD2
Nuclear receptor binding SET domain protein 2.
     
 0.573
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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