STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC8Transmembrane channel-like protein. (723 aa)    
Predicted Functional Partners:
KCNG4
Potassium voltage-gated channel modifier subfamily G member 4; Belongs to the potassium channel family.
    
 
 0.804
RCSD1
RCSD domain containing 1.
   
  
 0.674
MYBPC1
Myosin binding protein C, slow type.
    
 0.673
SYNGR2
Synaptogyrin.
 
    
 0.640
CPT2
Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.
    
 
 0.589
SASH3
SAM and SH3 domain containing 3.
   
 
 0.578
DCAF6
DDB1 and CUL4 associated factor 6.
      
 0.529
WDR18
WD repeat domain 18.
   
 0.522
CCDC102A
Coiled-coil domain containing 102A.
      
 0.521
SH2D3A
SH2 domain containing 3A.
   
 0.517
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.