Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADM | IRF6 | ENSFCAP00000043827 | ENSFCAP00000014042 | Adrenomedullin. | Interferon regulatory factor 6. | 0.568 |
ARHGAP29 | IRF6 | ENSFCAP00000018161 | ENSFCAP00000014042 | Rho GTPase activating protein 29. | Interferon regulatory factor 6. | 0.500 |
ARHGAP29 | RIPK4 | ENSFCAP00000018161 | ENSFCAP00000038515 | Rho GTPase activating protein 29. | Receptor interacting serine/threonine kinase 4. | 0.529 |
ARHGAP29 | VAX1 | ENSFCAP00000018161 | ENSFCAP00000036794 | Rho GTPase activating protein 29. | Ventral anterior homeobox 1. | 0.519 |
CHUK | IRF6 | ENSFCAP00000060797 | ENSFCAP00000014042 | Component of inhibitor of nuclear factor kappa B kinase complex. | Interferon regulatory factor 6. | 0.555 |
CHUK | MYD88 | ENSFCAP00000060797 | ENSFCAP00000036847 | Component of inhibitor of nuclear factor kappa B kinase complex. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.721 |
CHUK | RIPK4 | ENSFCAP00000060797 | ENSFCAP00000038515 | Component of inhibitor of nuclear factor kappa B kinase complex. | Receptor interacting serine/threonine kinase 4. | 0.625 |
ESRP2 | GRHL3 | ENSFCAP00000039536 | ENSFCAP00000016119 | Epithelial splicing regulatory protein 2. | Grainyhead like transcription factor 3. | 0.449 |
ESRP2 | IRF6 | ENSFCAP00000039536 | ENSFCAP00000014042 | Epithelial splicing regulatory protein 2. | Interferon regulatory factor 6. | 0.491 |
GRHL3 | ESRP2 | ENSFCAP00000016119 | ENSFCAP00000039536 | Grainyhead like transcription factor 3. | Epithelial splicing regulatory protein 2. | 0.449 |
GRHL3 | IRF6 | ENSFCAP00000016119 | ENSFCAP00000014042 | Grainyhead like transcription factor 3. | Interferon regulatory factor 6. | 0.654 |
GRHL3 | OVOL1 | ENSFCAP00000016119 | ENSFCAP00000048515 | Grainyhead like transcription factor 3. | Ovo like transcriptional repressor 1. | 0.565 |
GRHL3 | RIPK4 | ENSFCAP00000016119 | ENSFCAP00000038515 | Grainyhead like transcription factor 3. | Receptor interacting serine/threonine kinase 4. | 0.505 |
IRF6 | ADM | ENSFCAP00000014042 | ENSFCAP00000043827 | Interferon regulatory factor 6. | Adrenomedullin. | 0.568 |
IRF6 | ARHGAP29 | ENSFCAP00000014042 | ENSFCAP00000018161 | Interferon regulatory factor 6. | Rho GTPase activating protein 29. | 0.500 |
IRF6 | CHUK | ENSFCAP00000014042 | ENSFCAP00000060797 | Interferon regulatory factor 6. | Component of inhibitor of nuclear factor kappa B kinase complex. | 0.555 |
IRF6 | ESRP2 | ENSFCAP00000014042 | ENSFCAP00000039536 | Interferon regulatory factor 6. | Epithelial splicing regulatory protein 2. | 0.491 |
IRF6 | GRHL3 | ENSFCAP00000014042 | ENSFCAP00000016119 | Interferon regulatory factor 6. | Grainyhead like transcription factor 3. | 0.654 |
IRF6 | MYD88 | ENSFCAP00000014042 | ENSFCAP00000036847 | Interferon regulatory factor 6. | Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. | 0.469 |
IRF6 | OVOL1 | ENSFCAP00000014042 | ENSFCAP00000048515 | Interferon regulatory factor 6. | Ovo like transcriptional repressor 1. | 0.465 |
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