STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NTAN1N-terminal asparagine amidase. (310 aa)    
Predicted Functional Partners:
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
 
    
 0.875
PDXDC1
Pyridoxal dependent decarboxylase domain containing 1.
      
 0.832
TMEM82
Transmembrane protein 82.
      
 0.800
SPATA3
Spermatogenesis associated 3.
      
 0.783
SCP2D1
SCP2 sterol binding domain containing 1.
   
  
 0.759
SH3GL2
SH3 domain containing GRB2 like 2, endophilin A1.
      
 0.729
CEP78
Centrosomal protein 78.
   
  
 0.714
SH3BP4
SH3 domain binding protein 4.
      
 0.710
CEP250
Centrosomal protein 250.
      
 0.704
CEP41
Centrosomal protein 41.
      
 0.673
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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