STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACSIN1Protein kinase C and casein kinase substrate in neurons 1. (444 aa)    
Predicted Functional Partners:
PACSIN3
Protein kinase C and casein kinase substrate in neurons 3.
  
 
0.850
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2.
  
 
 
0.836
HTT
Huntingtin.
    
 
 0.768
CLIP3
CAP-Gly domain containing linker protein 3.
      
 0.691
SPDEF
SAM pointed domain containing ETS transcription factor.
      
 0.679
FCHO2
FCH domain only 2.
   
 
 0.677
SCUBE3
Signal peptide, CUB domain and EGF like domain containing 3.
      
 0.656
GCSAM
Germinal center associated signaling and motility.
      
 0.628
ELMSAN1
ELM2 and Myb/SANT domain containing 1.
      
 0.624
RPS10
Ribosomal protein S10.
      
 0.619
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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