STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARFGEF1ADP ribosylation factor guanine nucleotide exchange factor 1. (1849 aa)    
Predicted Functional Partners:
TMEM208
Transmembrane protein 208.
      
 0.708
FBXL8
F-box domain-containing protein.
     
 0.705
XPO7
Exportin 7.
   
  
 0.686
ENSFCAP00000033958
Uncharacterized protein.
    
 0.685
ARL1
ADP ribosylation factor like GTPase 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.685
NMT1
Glycylpeptide N-tetradecanoyltransferase; Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins; Belongs to the NMT family.
   
  
 0.621
ARF1
ADP ribosylation factor 1; Belongs to the small GTPase superfamily. Arf family.
    
 0.613
ARL6
ADP ribosylation factor like GTPase 6; Belongs to the small GTPase superfamily. Arf family.
    
 0.613
ARF3
ADP ribosylation factor 3; Belongs to the small GTPase superfamily. Arf family.
    
 0.613
ARHGEF1
Rho guanine nucleotide exchange factor 1.
      
 0.569
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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