STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TXLNBTaxilin beta. (689 aa)    
Predicted Functional Partners:
TMEM236
Transmembrane protein 236.
      
 0.792
PIFO
Uncharacterized protein.
      
 0.744
PRPF6
Pre-mRNA processing factor 6.
      
 0.743
CDHR3
Cadherin related family member 3.
      
 0.731
RNF122
Ring finger protein 122.
      
 0.718
SHISA6
Shisa family member 6.
      
 0.669
LOC101098536
Uncharacterized protein.
    
 
 0.669
PPP6R3
Protein phosphatase 6 regulatory subunit 3.
      
 0.667
ZFYVE26
Zinc finger FYVE-type containing 26.
      
 0.660
RRAD
GTP-binding protein; Belongs to the small GTPase superfamily. RGK family.
      
 0.655
Your Current Organism:
Felis catus
NCBI taxonomy Id: 9685
Other names: F. catus, Felis domesticus, Felis silvestris catus, Korat cats, cat, cats, domestic cat
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.